Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna adenine methylase | HMPREF9720_1873 | Not Available | Negative | 3269050 - 3269854 | 30921.9 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_1594 | Not Available | Positive | 3271326 - 3274523 | 116770.0 |
| susd family protein | HMPREF9720_1595 | Not Available | Positive | 3274549 - 3276165 | 59708.8 |
| hypothetical protein | HMPREF9720_1596 | Not Available | Positive | 3276203 - 3278656 | 88017.3 |
| peptidase, s8/s53 family | HMPREF9720_1597 | Not Available | Positive | 3278735 - 3280762 | 70736.1 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_1600 | Not Available | Positive | 3281602 - 3284895 | 122151.0 |
| hypothetical protein | HMPREF9720_1601 | Not Available | Positive | 3284911 - 3286482 | 59417.0 |
| hypothetical protein | HMPREF9720_1602 | Not Available | Positive | 3286520 - 3287413 | 33823.9 |
| hypothetical protein | HMPREF9720_1603 | Not Available | Positive | 3287424 - 3289349 | 69891.4 |
| Trna-phe | Not Available | Not Available | Positive | 3289553 - 3289628 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
