Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uvrd/rep helicase | HMPREF9720_2063 | Not Available | Negative | 3251757 - 3253661 | 73347.9 |
| hypothetical protein | HMPREF9720_2064 | Not Available | Negative | 3253642 - 3255582 | 73187.0 |
| hypothetical protein | HMPREF9720_2065 | Not Available | Negative | 3256474 - 3258222 | 65899.1 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_2066 | Not Available | Negative | 3258242 - 3261256 | 111409.0 |
| hypothetical protein | HMPREF9720_2067 | Not Available | Negative | 3261735 - 3262475 | 29153.7 |
| plasmid recombination enzyme | HMPREF9720_2068 | Not Available | Negative | 3264101 - 3265540 | 55071.0 |
| site-specific recombinase, phage integrase family | HMPREF9720_2069 | Not Available | Negative | 3265920 - 3267143 | 47276.6 |
| hypothetical protein | HMPREF9720_2070 | Not Available | Negative | 3267407 - 3268183 | 29290.2 |
| conjugative transposon protein trae | HMPREF9720_0278 | Not Available | Negative | 3268186 - 3268389 | 7135.9 |
| hypothetical protein | HMPREF9720_0279 | Not Available | Negative | 3268534 - 3268779 | 8585.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
