Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ser/thr phosphatase family protein | HMPREF9720_2284 | Not Available | Negative | 3238501 - 3240102 | 58861.7 |
| susd family protein | HMPREF9720_2285 | Not Available | Negative | 3240126 - 3241961 | 69935.0 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_2286 | Not Available | Negative | 3241974 - 3245606 | 135264.0 |
| hypothetical protein | HMPREF9720_2287 | Not Available | Positive | 3246161 - 3246654 | 18354.6 |
| hypothetical protein | HMPREF9720_2057 | Not Available | Negative | 3246797 - 3246922 | 4757.96 |
| hypothetical protein | HMPREF9720_2058 | Not Available | Positive | 3246998 - 3248146 | 42447.5 |
| biotin-requiring enzyme | HMPREF9720_2059 | Not Available | Positive | 3248270 - 3250123 | 67479.5 |
| large conductance mechanosensitive channel protein | HMPREF9720_2060 | Not Available | Positive | 3250243 - 3250725 | 17526.6 |
| ion channel | HMPREF9720_2061 | Not Available | Negative | 3250756 - 3251367 | 23718.6 |
| Trna-met | Not Available | Not Available | Positive | 3251570 - 3251646 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
