Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine-fructose-6-phosphate transaminase (isomerizing) | HMPREF9720_2274 | Not Available | Positive | 3222925 - 3224769 | 67403.1 |
| transporter, major facilitator family protein | HMPREF9720_2275 | Not Available | Negative | 3224867 - 3226216 | 49255.7 |
| glycerophosphodiester phosphodiesterase family protein | HMPREF9720_2276 | Not Available | Negative | 3226238 - 3227236 | 38151.9 |
| mannitol dehydrogenase domain protein | HMPREF9720_2277 | Not Available | Negative | 3227251 - 3228408 | 41674.2 |
| rna polymerase sigma-70 factor | HMPREF9720_2278 | Not Available | Positive | 3228700 - 3229290 | 23104.7 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_2279 | Not Available | Positive | 3229371 - 3230378 | 38206.1 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_2280 | Not Available | Positive | 3230460 - 3234002 | 130324.0 |
| susd family protein | HMPREF9720_2281 | Not Available | Positive | 3234023 - 3235489 | 54835.5 |
| fibrobacter succinogene major paralogous domain protein | HMPREF9720_2282 | Not Available | Positive | 3235515 - 3237500 | 72049.9 |
| glycerophosphodiester phosphodiesterase family protein | HMPREF9720_2283 | Not Available | Positive | 3237561 - 3238433 | 32407.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
