Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin kinase | HMPREF9720_2264 | Not Available | Negative | 3212617 - 3213354 | 27072.7 |
| coa binding domain protein | HMPREF9720_2265 | Not Available | Negative | 3213380 - 3214036 | 23949.1 |
| lysm domain protein | HMPREF9720_2266 | Not Available | Negative | 3214044 - 3215879 | 68366.9 |
| exonuclease | HMPREF9720_2267 | Not Available | Negative | 3215876 - 3216643 | 29545.3 |
| dna polymerase iii, beta subunit | HMPREF9720_2268 | Not Available | Negative | 3216655 - 3217779 | 40676.9 |
| phosphorylase family | HMPREF9720_2269 | Not Available | Negative | 3217819 - 3218697 | 32619.3 |
| phosphoglucosamine mutase | HMPREF9720_2270 | Not Available | Positive | 3218812 - 3220203 | 50175.2 |
| hypothetical protein | HMPREF9720_2271 | Not Available | Positive | 3220214 - 3220654 | 15789.7 |
| peptidase dimerization domain protein | HMPREF9720_2272 | Not Available | Positive | 3220667 - 3222034 | 50248.4 |
| inositol monophosphatase family protein | HMPREF9720_2273 | Not Available | Positive | 3222044 - 3222826 | 28725.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
