Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2254 | Not Available | Negative | 3199945 - 3200154 | 7836.52 |
| dna polymerase iii, alpha subunit | HMPREF9720_2255 | Not Available | Positive | 3200279 - 3203935 | 137928.0 |
| thioredoxin | HMPREF9720_2256 | Not Available | Positive | 3203959 - 3204273 | 11453.9 |
| aldose 1-epimerase | HMPREF9720_2257 | Not Available | Positive | 3204275 - 3205267 | 37163.2 |
| hypothetical protein | HMPREF9720_2258 | Not Available | Negative | 3205444 - 3206328 | 34049.1 |
| hypothetical protein | HMPREF9720_2259 | Not Available | Positive | 3206715 - 3207149 | 15519.6 |
| hypothetical protein | HMPREF9720_2260 | Not Available | Positive | 3207290 - 3209131 | 66820.1 |
| nitroreductase family protein | HMPREF9720_2261 | Not Available | Negative | 3209291 - 3209809 | 19220.3 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF9720_2262 | Not Available | Positive | 3209953 - 3212046 | 80387.7 |
| acyl-coa thioester hydrolase, ybgc/ybaw family | HMPREF9720_2263 | Not Available | Negative | 3212200 - 3212613 | 16527.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
