Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | HMPREF9720_2244 | Not Available | Negative | 3188965 - 3189891 | 33122.5 |
| bacterial capsule synthesis protein | HMPREF9720_2245 | Not Available | Positive | 3190136 - 3191236 | 40680.0 |
| rubrerythrin | HMPREF9720_2246 | Not Available | Positive | 3191347 - 3191925 | 21953.8 |
| atp-binding cassette protein, chvd family | HMPREF9720_2247 | Not Available | Positive | 3192139 - 3193815 | 62890.1 |
| histidine--trna ligase | HMPREF9720_2248 | Not Available | Positive | 3193847 - 3195202 | 50371.9 |
| peptidase, s41 family | HMPREF9720_2249 | Not Available | Positive | 3195304 - 3196881 | 57397.8 |
| hypothetical protein | HMPREF9720_2250 | Not Available | Positive | 3196966 - 3197283 | 12290.4 |
| hypothetical protein | HMPREF9720_2251 | Not Available | Positive | 3197473 - 3198414 | 34242.0 |
| putative shikimate dehydrogenase | HMPREF9720_2252 | Not Available | Positive | 3198418 - 3199155 | 26750.9 |
| tonb family domain protein | HMPREF9720_2253 | Not Available | Positive | 3199282 - 3199821 | 20122.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
