Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | HMPREF9720_2224 | Not Available | Positive | 3163419 - 3164318 | 33306.7 |
| pyridoxal-phosphate dependent trpb-like enzyme | HMPREF9720_2225 | Not Available | Negative | 3164466 - 3165827 | 49323.2 |
| hypothetical protein | HMPREF9720_2226 | Not Available | Positive | 3165909 - 3166049 | 5054.06 |
| phenylalanine--trna ligase, beta subunit | HMPREF9720_2227 | Not Available | Positive | 3166351 - 3168816 | 90859.0 |
| yhhn-like protein | HMPREF9720_2228 | Not Available | Positive | 3168946 - 3169587 | 23235.2 |
| glycosyl hydrolase family 20, catalytic domain protein | HMPREF9720_2229 | Not Available | Negative | 3169723 - 3171906 | 82169.8 |
| mazg family protein | HMPREF9720_2230 | Not Available | Positive | 3172031 - 3172840 | 30999.5 |
| bacterial transferase hexapeptide repeat protein | HMPREF9720_2231 | Not Available | Positive | 3172978 - 3173505 | 18878.7 |
| rho termination factor, rna-binding domain protein | HMPREF9720_2232 | Not Available | Positive | 3173513 - 3174820 | 50086.2 |
| lyttr dna-binding domain protein | HMPREF9720_2233 | Not Available | Positive | 3174817 - 3175578 | 28509.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
