Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugation system atpase, trag family | HMPREF9720_0289 | Not Available | Negative | 3149408 - 3151918 | 95854.4 |
| hypothetical protein | HMPREF9720_0290 | Not Available | Negative | 3151923 - 3152180 | 9504.2 |
| reverse transcriptase (rna-dependent dna polymerase) | HMPREF9720_0292 | Not Available | Negative | 3152309 - 3154126 | 70720.8 |
| site-specific recombinase, phage integrase family | HMPREF9720_2217 | Not Available | Negative | 3154915 - 3155886 | 37442.2 |
| hypothetical protein | HMPREF9720_2218 | Not Available | Positive | 3156804 - 3157088 | 11061.4 |
| Trna-gly | Not Available | Not Available | Positive | 3157203 - 3157274 | Not Available |
| amp-binding enzyme | HMPREF9720_2220 | Not Available | Negative | 3157341 - 3159248 | 70567.3 |
| gtp-binding protein lepa | HMPREF9720_2221 | Not Available | Negative | 3159260 - 3161074 | 67770.8 |
| putative 4-hydroxybenzoate polyprenyltransferase | HMPREF9720_2222 | Not Available | Positive | 3161264 - 3162136 | 31113.6 |
| diaminopimelate decarboxylase | HMPREF9720_2223 | Not Available | Positive | 3162186 - 3163346 | 43206.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
