Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nol1/nop2/sun family protein | HMPREF9720_1769 | Not Available | Positive | 3092479 - 3093921 | 52043.8 |
| transcriptional regulator, merr family | HMPREF9720_1770 | Not Available | Positive | 3093924 - 3094490 | 21191.3 |
| dinuclear metal center protein, ybgi family | HMPREF9720_1771 | Not Available | Positive | 3094672 - 3095457 | 28772.6 |
| putative zinc ribbon domain protein | HMPREF9720_1772 | Not Available | Positive | 3095481 - 3096242 | 28853.5 |
| cupin domain protein | HMPREF9720_1773 | Not Available | Negative | 3096309 - 3096758 | 15699.8 |
| nad+ synthase | HMPREF9720_1774 | Not Available | Positive | 3097060 - 3098640 | 58181.0 |
| positive regulator of sigma(e), rsec/mucc | HMPREF9720_1775 | Not Available | Positive | 3098644 - 3099072 | 14945.1 |
| ferredoxin | HMPREF9720_1776 | Not Available | Positive | 3099072 - 3100157 | 37096.1 |
| electron transport complex, rnfabcdge type, c subunit | HMPREF9720_1777 | Not Available | Positive | 3100253 - 3101596 | 47135.0 |
| electron transport complex, rnfabcdge type, d subunit | HMPREF9720_1778 | Not Available | Positive | 3101627 - 3102598 | 33884.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
