Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d12 class n6 adenine-specific dna methyltransferase | HMPREF9720_0683 | Not Available | Positive | 296842 - 297790 | 36863.7 |
| phosphoadenosine phosphosulfate reductase family protein | HMPREF9720_0684 | Not Available | Positive | 297768 - 298817 | 39551.6 |
| c-5 cytosine-specific dna methylase | HMPREF9720_0685 | Not Available | Positive | 298814 - 300451 | 61181.3 |
| hypothetical protein | HMPREF9720_0686 | Not Available | Positive | 304221 - 304526 | 10987.0 |
| hypothetical protein | HMPREF9720_0687 | Not Available | Positive | 304742 - 306091 | 50231.6 |
| hypothetical protein | HMPREF9720_0688 | Not Available | Positive | 307925 - 308143 | 8504.57 |
| hypothetical protein | HMPREF9720_0689 | Not Available | Positive | 308121 - 309062 | 35484.1 |
| hypothetical protein | HMPREF9720_0690 | Not Available | Positive | 309154 - 310803 | 63334.6 |
| hypothetical protein | HMPREF9720_0691 | Not Available | Positive | 311078 - 311320 | 9407.5 |
| d12 class n6 adenine-specific dna methyltransferase | HMPREF9720_0692 | Not Available | Positive | 311388 - 312206 | 31629.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
