Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic binding protein | HMPREF9720_1739 | Not Available | Positive | 3068906 - 3070045 | 41724.7 |
| iron chelate uptake abc transporter, fect family, permease protein | HMPREF9720_1740 | Not Available | Positive | 3070046 - 3071026 | 33940.3 |
| abc transporter, atp-binding protein | HMPREF9720_1741 | Not Available | Positive | 3071023 - 3071781 | 28197.4 |
| hypothetical protein | HMPREF9720_1742 | Not Available | Positive | 3071778 - 3072374 | 23089.6 |
| ompa family protein | HMPREF9720_1743 | Not Available | Negative | 3072455 - 3073855 | 51814.4 |
| putative plasmid recombination enzyme | HMPREF9720_1744 | Not Available | Negative | 3073910 - 3075367 | 55088.3 |
| hypothetical protein | HMPREF9720_1745 | Not Available | Negative | 3075585 - 3076430 | 31432.4 |
| hypothetical protein | HMPREF9720_1746 | Not Available | Negative | 3076420 - 3077010 | 22193.2 |
| hypothetical protein | HMPREF9720_1747 | Not Available | Negative | 3077001 - 3077402 | 15782.2 |
| hypothetical protein | HMPREF9720_1748 | Not Available | Negative | 3077399 - 3077851 | 17630.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
