Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna binding domain, excisionase family | HMPREF9720_1678 | Not Available | Positive | 3009466 - 3009840 | 14588.8 |
| hypothetical protein | HMPREF9720_1679 | Not Available | Positive | 3009860 - 3010918 | 39913.1 |
| hypothetical protein | HMPREF9720_1680 | Not Available | Positive | 3011021 - 3011908 | 34037.7 |
| hypothetical protein | HMPREF9720_1681 | Not Available | Positive | 3012107 - 3012595 | 18451.3 |
| hypothetical protein | HMPREF9720_1682 | Not Available | Positive | 3012597 - 3012923 | 11931.0 |
| hypothetical protein | HMPREF9720_1683 | Not Available | Positive | 3012978 - 3013355 | 13299.9 |
| hypothetical protein | HMPREF9720_1684 | Not Available | Positive | 3013371 - 3013667 | 10756.6 |
| conjugation system atpase, trag family | HMPREF9720_1685 | Not Available | Positive | 3013779 - 3016487 | 103972.0 |
| hypothetical protein | HMPREF9720_1686 | Not Available | Positive | 3016499 - 3019045 | 95901.4 |
| hypothetical protein | HMPREF9720_1687 | Not Available | Positive | 3019042 - 3019767 | 27843.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
