Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m16 inactive domain protein | HMPREF9720_1668 | Not Available | Negative | 2998031 - 2999269 | 46789.6 |
| hypothetical protein | HMPREF9720_1669 | Not Available | Negative | 2999476 - 2999646 | 6166.56 |
| pyruvate synthase | HMPREF9720_1670 | Not Available | Positive | 3000006 - 3003539 | 128393.0 |
| hypothetical protein | HMPREF9720_1671 | Not Available | Positive | 3003738 - 3004514 | 29763.3 |
| hypothetical protein | HMPREF9720_1672 | Not Available | Positive | 3004795 - 3004989 | 7117.56 |
| hypothetical protein | HMPREF9720_1673 | Not Available | Positive | 3005092 - 3005949 | 30920.2 |
| meta domain protein | HMPREF9720_1674 | Not Available | Positive | 3006192 - 3006623 | 16123.4 |
| hypothetical protein | HMPREF9720_1675 | Not Available | Positive | 3006643 - 3006792 | 5657.01 |
| site-specific recombinase, phage integrase family | HMPREF9720_1676 | Not Available | Positive | 3007153 - 3008361 | 46504.6 |
| hypothetical protein | HMPREF9720_1677 | Not Available | Positive | 3008561 - 3009265 | 26277.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
