Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | HMPREF9720_1657 | Not Available | Negative | 2986881 - 2987855 | 34395.9 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | HMPREF9720_1658 | Not Available | Negative | 2987860 - 2989104 | 44524.4 |
| abc transporter, atp-binding protein | HMPREF9720_1659 | Not Available | Negative | 2989177 - 2989965 | 29550.7 |
| phosphate-selective porin o and p | HMPREF9720_1660 | Not Available | Negative | 2990266 - 2991489 | 45206.8 |
| atp-dependent dna helicase recq | HMPREF9720_1661 | Not Available | Positive | 2991759 - 2993951 | 82215.7 |
| hypothetical protein | HMPREF9720_1663 | Not Available | Positive | 2994028 - 2994246 | 8245.35 |
| hypothetical protein | HMPREF9720_1664 | Not Available | Positive | 2994466 - 2994708 | 9616.32 |
| hypothetical protein | HMPREF9720_1665 | Not Available | Positive | 2995151 - 2995354 | 7329.87 |
| dimethyladenosine transferase | HMPREF9720_1666 | Not Available | Positive | 2995356 - 2996507 | 40755.7 |
| peptidase m16 inactive domain protein | HMPREF9720_1667 | Not Available | Negative | 2996730 - 2998034 | 48503.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
