Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_1647 | Not Available | Negative | 2979501 - 2979653 | 5626.9 |
| hypothetical protein | HMPREF9720_1648 | Not Available | Negative | 2979809 - 2980099 | 10950.2 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | HMPREF9720_1649 | Not Available | Negative | 2980096 - 2981412 | 48269.4 |
| hypothetical protein | HMPREF9720_1650 | Not Available | Negative | 2981428 - 2982093 | 23854.4 |
| ribosomal protein s16 | HMPREF9720_1651 | Not Available | Negative | 2982305 - 2982904 | 21487.6 |
| Trna-arg | Not Available | Not Available | Positive | 2983048 - 2983121 | Not Available |
| response regulator receiver domain protein | HMPREF9720_1653 | Not Available | Negative | 2983387 - 2983770 | 14730.0 |
| peptidase, m23 family | HMPREF9720_1654 | Not Available | Negative | 2983827 - 2985554 | 63695.8 |
| regulatory protein recx | HMPREF9720_1655 | Not Available | Negative | 2985539 - 2986057 | 19938.9 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | HMPREF9720_1656 | Not Available | Negative | 2986039 - 2986881 | 30263.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
