Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | HMPREF9720_1144 | Not Available | Negative | 283933 - 284595 | 24701.5 |
| fibrobacter succinogene major paralogous domain protein | HMPREF9720_1146 | Not Available | Positive | 285431 - 286870 | 51472.6 |
| tonb-dependent receptor | HMPREF9720_1147 | Not Available | Negative | 287245 - 289431 | 79190.5 |
| transcriptional regulator, blai/meci/copy family | HMPREF9720_1148 | Not Available | Negative | 289467 - 289841 | 14353.2 |
| putative trna (guanine-n(7)-)-methyltransferase | HMPREF9720_1149 | Not Available | Negative | 290013 - 290762 | 29364.8 |
| hypothetical protein | HMPREF9720_1151 | Not Available | Negative | 290768 - 291202 | 15712.8 |
| hypothetical protein | HMPREF9720_1150 | Not Available | Positive | 291183 - 291383 | 6792.22 |
| psp1 c-terminal domain protein | HMPREF9720_1152 | Not Available | Negative | 291523 - 293157 | 61146.0 |
| mate efflux family protein | HMPREF9720_1153 | Not Available | Negative | 293209 - 294570 | 49712.9 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF9720_1154 | Not Available | Negative | 294675 - 296732 | 78360.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
