Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease iii | HMPREF9720_1637 | Not Available | Positive | 2969338 - 2970036 | 26442.2 |
| dna repair protein radc | HMPREF9720_1638 | Not Available | Positive | 2970130 - 2970765 | 23033.8 |
| glycine--trna ligase | HMPREF9720_1639 | Not Available | Positive | 2971188 - 2972732 | 59725.1 |
| rnase h domain protein, yqgf family | HMPREF9720_1640 | Not Available | Positive | 2972743 - 2973156 | 15371.7 |
| peptide deformylase | HMPREF9720_1641 | Not Available | Positive | 2973153 - 2973698 | 20870.0 |
| hypothetical protein | HMPREF9720_1642 | Not Available | Negative | 2973782 - 2974366 | 21852.2 |
| hypothetical protein | HMPREF9720_1644 | Not Available | Negative | 2974981 - 2975448 | 16751.0 |
| hypothetical protein | HMPREF9720_1643 | Not Available | Positive | 2975447 - 2975626 | 7139.83 |
| pyruvate, phosphate dikinase | HMPREF9720_1645 | Not Available | Negative | 2975638 - 2978367 | 100143.0 |
| hypothetical protein | HMPREF9720_1646 | Not Available | Negative | 2978540 - 2979490 | 35939.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
