Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | HMPREF9720_1617 | Not Available | Positive | 2951186 - 2951875 | 25639.0 |
| mate efflux family protein | HMPREF9720_1618 | Not Available | Negative | 2951930 - 2953282 | 49137.8 |
| cyclic nucleotide-binding domain protein | HMPREF9720_1619 | Not Available | Negative | 2953357 - 2953920 | 21560.7 |
| hsp20/alpha crystallin family protein | HMPREF9720_1620 | Not Available | Positive | 2954070 - 2954579 | 19400.2 |
| hypothetical protein | HMPREF9720_1621 | Not Available | Negative | 2954572 - 2954745 | 6245.44 |
| cutc family protein | HMPREF9720_1622 | Not Available | Positive | 2954917 - 2955651 | 26114.2 |
| transglutaminase-like protein | HMPREF9720_1623 | Not Available | Positive | 2955648 - 2956835 | 44420.1 |
| acetyltransferase, gnat family | HMPREF9720_1624 | Not Available | Negative | 2957011 - 2957664 | 23956.3 |
| 4fe-4s binding domain protein | HMPREF9720_1625 | Not Available | Negative | 2957666 - 2958574 | 31118.4 |
| hypothetical protein | HMPREF9720_1626 | Not Available | Positive | 2958706 - 2959392 | 24506.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
