Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_0261 | Not Available | Negative | 2925451 - 2925741 | 11398.6 |
| hypothetical protein | HMPREF9720_0262 | Not Available | Negative | 2925759 - 2926394 | 24681.0 |
| hypothetical protein | HMPREF9720_0263 | Not Available | Negative | 2926544 - 2927443 | 33781.9 |
| hypothetical protein | HMPREF9720_0264 | Not Available | Negative | 2927519 - 2928508 | 37927.6 |
| putative oxygen-independent coproporphyrinogen iii oxidase | HMPREF9720_0149 | Not Available | Positive | 2929249 - 2930361 | 40922.1 |
| hypothetical protein | HMPREF9720_0150 | Not Available | Negative | 2930392 - 2930508 | 4455.55 |
| alpha-glucan phosphorylase | HMPREF9720_0151 | Not Available | Positive | 2930516 - 2934766 | 161496.0 |
| putative glycogen debranching enzyme, archaeal type | HMPREF9720_0152 | Not Available | Positive | 2934877 - 2937009 | 79545.7 |
| glycosyltransferase, group 1 family protein | HMPREF9720_0153 | Not Available | Positive | 2937037 - 2938350 | 48675.3 |
| glycosyl hydrolase, family 57 | HMPREF9720_0154 | Not Available | Positive | 2938366 - 2939580 | 46599.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
