Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylserine decarboxylase | HMPREF9720_1062 | Not Available | Positive | 2903708 - 2904379 | 25274.1 |
| hypothetical protein | HMPREF9720_1063 | Not Available | Positive | 2904392 - 2905498 | 40119.6 |
| bifunctional riboflavin kinase/fmn adenylyltransferase domain protein | HMPREF9720_1064 | Not Available | Positive | 2905498 - 2905863 | 13750.6 |
| adenosylhomocysteinase | HMPREF9720_1065 | Not Available | Positive | 2905870 - 2907279 | 51889.3 |
| uridine kinase | HMPREF9720_0375 | Not Available | Negative | 2907368 - 2908003 | 23937.8 |
| dna gyrase, b subunit | HMPREF9720_0376 | Not Available | Negative | 2908069 - 2910030 | 73021.5 |
| abc transporter, atp-binding protein | HMPREF9720_0377 | Not Available | Negative | 2910102 - 2910839 | 27516.5 |
| gaf domain protein | HMPREF9720_0378 | Not Available | Positive | 2911093 - 2912325 | 47910.5 |
| hypothetical protein | HMPREF9720_0249 | Not Available | Negative | 2912655 - 2912897 | 9126.46 |
| hypothetical protein | HMPREF9720_0250 | Not Available | Positive | 2912946 - 2913152 | 7748.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
