Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_1052 | Not Available | Positive | 2892841 - 2893125 | 10535.7 |
| hypothetical protein | HMPREF9720_1053 | Not Available | Positive | 2893153 - 2895150 | 73971.7 |
| hypothetical protein | HMPREF9720_1054 | Not Available | Negative | 2895188 - 2895532 | 12869.4 |
| chloride transporter, clc family | HMPREF9720_1055 | Not Available | Negative | 2895612 - 2897393 | 65832.4 |
| tryptophan--trna ligase | HMPREF9720_1056 | Not Available | Negative | 2897424 - 2898548 | 42361.8 |
| hypothetical protein | HMPREF9720_1057 | Not Available | Positive | 2898588 - 2898719 | 4781.76 |
| lysr substrate binding domain protein | HMPREF9720_1058 | Not Available | Positive | 2898860 - 2899759 | 33287.5 |
| iojap-like protein | HMPREF9720_1059 | Not Available | Positive | 2900341 - 2900691 | 13129.6 |
| atp-dependent metallopeptidase hflb | HMPREF9720_1060 | Not Available | Positive | 2900731 - 2902809 | 75453.1 |
| phosphatidate cytidylyltransferase | HMPREF9720_1061 | Not Available | Positive | 2902839 - 2903687 | 30473.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
