Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | HMPREF9720_1042 | Not Available | Negative | 2879738 - 2881969 | 84794.8 |
| bacterial transferase hexapeptide repeat protein | HMPREF9720_1043 | Not Available | Negative | 2882019 - 2882576 | 20048.1 |
| abc transporter, atp-binding protein | HMPREF9720_1045 | Not Available | Negative | 2882591 - 2884420 | 68016.7 |
| hypothetical protein | HMPREF9720_1044 | Not Available | Positive | 2884404 - 2884517 | 3902.0 |
| ribonuclease hi | HMPREF9720_1046 | Not Available | Negative | 2884561 - 2885025 | 17182.3 |
| valine--trna ligase | HMPREF9720_1047 | Not Available | Negative | 2885032 - 2887659 | 99941.5 |
| endopeptidase la | HMPREF9720_1048 | Not Available | Positive | 2887777 - 2890206 | 89900.8 |
| 3-deoxy-d-manno-octulosonate cytidylyltransferase | HMPREF9720_1049 | Not Available | Positive | 2890286 - 2891041 | 27952.3 |
| 3-deoxy-8-phosphooctulonate synthase | HMPREF9720_1050 | Not Available | Positive | 2891120 - 2891872 | 27332.1 |
| sugar isomerase, kpsf/gutq family | HMPREF9720_1051 | Not Available | Positive | 2891872 - 2892837 | 34406.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
