Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_3043 | Not Available | Negative | 273853 - 274065 | 7947.37 |
| hypothetical protein | HMPREF9720_3044 | Not Available | Negative | 274072 - 274725 | 25819.2 |
| transketolase, pyridine binding domain protein | HMPREF9720_1135 | Not Available | Positive | 275312 - 276593 | 46164.1 |
| sigma-70 region 2 | HMPREF9720_1136 | Not Available | Positive | 276803 - 277294 | 19245.9 |
| hypothetical protein | HMPREF9720_1137 | Not Available | Positive | 277306 - 277890 | 21040.4 |
| hypothetical protein | HMPREF9720_1138 | Not Available | Negative | 278008 - 278451 | 17091.2 |
| methionine adenosyltransferase | HMPREF9720_1140 | Not Available | Positive | 278775 - 280079 | 47900.9 |
| peptidase do | HMPREF9720_1141 | Not Available | Positive | 280228 - 281727 | 53588.2 |
| sigma-70 region 2 | HMPREF9720_1142 | Not Available | Positive | 281782 - 282642 | 32669.0 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | HMPREF9720_1143 | Not Available | Negative | 282839 - 283732 | 31851.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
