Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | HMPREF9720_2046 | Not Available | Positive | 2850671 - 2851663 | 36364.9 |
| rna polymerase sigma-70 factor | HMPREF9720_2047 | Not Available | Negative | 2851827 - 2852411 | 22827.3 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_2048 | Not Available | Positive | 2852933 - 2853889 | 36014.4 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_2049 | Not Available | Positive | 2854202 - 2857408 | 117631.0 |
| hypothetical protein | HMPREF9720_2050 | Not Available | Positive | 2857412 - 2859010 | 59418.2 |
| hypothetical protein | HMPREF9720_2051 | Not Available | Positive | 2859016 - 2859945 | 33995.4 |
| hypothetical protein | HMPREF9720_2052 | Not Available | Positive | 2859954 - 2861309 | 50905.4 |
| endo-beta-n-acetylglucosaminidase h domain protein | HMPREF9720_2053 | Not Available | Positive | 2861313 - 2862935 | 60410.2 |
| beta-eliminating lyase | HMPREF9720_2054 | Not Available | Negative | 2863231 - 2864607 | 51915.3 |
| rubredoxin | HMPREF9720_2055 | Not Available | Positive | 2864733 - 2864900 | 6140.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
