Alistipes sp. HGB5

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. HGB5 is a Gram-negative bacterium characterized by the presence of flagella, which likely contribute to its motility. This organism is notable for having a single replicon, indicating a straightforward genomic structure that may have implications for its replication and genetic stability. The presence of flagella in Alistipes sp. HGB5 suggests adaptations for navigating its environment, which could be essential for nutrient acquisition and colonization within its ecological niche. This motility may also play a role in interactions with other microorganisms, potentially influencing community dynamics in its habitat. The genomic data for Alistipes sp. HGB5 can be accessed from the accession number AENZ00000000.1. This information provides a basis for further exploration of its genetic makeup and functional capabilities, which could reveal additional insights into its biology. Overall, the traits of Alistipes sp. HGB5 highlight its potential ecological role as a motile, Gram-negative bacterium that may contribute to microbial diversity and functionality in its environment. Understanding such traits can enhance our knowledge of microbial ecology and the specific roles different species play in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. HGB5
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. HGB5 contig00005, whole genome shotgun sequence.

Gene Summary

Adenine Count

740743 bp

Thymine Count

730936 bp

Guanine Count

993821 bp

Cytosine Count

999115 bp

Genome Length

3464615 bp

Protein-coding Genes

2946 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate-semialdehyde dehydrogenaseHMPREF9720_2046Not AvailablePositive2850671 - 285166336364.9
rna polymerase sigma-70 factorHMPREF9720_2047Not AvailableNegative2851827 - 285241122827.3
sigma factor regulatory protein, fecr/pupr familyHMPREF9720_2048Not AvailablePositive2852933 - 285388936014.4
tonb-linked outer membrane protein, susc/raga familyHMPREF9720_2049Not AvailablePositive2854202 - 2857408117631.0
hypothetical proteinHMPREF9720_2050Not AvailablePositive2857412 - 285901059418.2
hypothetical proteinHMPREF9720_2051Not AvailablePositive2859016 - 285994533995.4
hypothetical proteinHMPREF9720_2052Not AvailablePositive2859954 - 286130950905.4
endo-beta-n-acetylglucosaminidase h domain proteinHMPREF9720_2053Not AvailablePositive2861313 - 286293560410.2
beta-eliminating lyaseHMPREF9720_2054Not AvailableNegative2863231 - 286460751915.3
rubredoxinHMPREF9720_2055Not AvailablePositive2864733 - 28649006140.18

Displaying genes 2481 – 2490 of 3009 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.