Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2036 | Not Available | Negative | 2836562 - 2837776 | 47239.0 |
| biotin--[acetyl-coa-carboxylase] ligase | HMPREF9720_2037 | Not Available | Negative | 2837809 - 2838561 | 28268.5 |
| putative 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | HMPREF9720_2038 | Not Available | Negative | 2838609 - 2839436 | 30230.3 |
| peptidase, s9a/b/c family, catalytic domain protein | HMPREF9720_2039 | Not Available | Positive | 2839566 - 2841689 | 78613.1 |
| aspartate kinase iii | HMPREF9720_2040 | Not Available | Positive | 2841841 - 2843094 | 46785.3 |
| hypothetical protein | HMPREF9720_2041 | Not Available | Negative | 2843278 - 2844369 | 42692.6 |
| hypothetical protein | HMPREF9720_2042 | Not Available | Positive | 2844385 - 2844651 | 9502.64 |
| putative translation initiation factor sui1 | HMPREF9720_2043 | Not Available | Positive | 2844808 - 2845122 | 11576.9 |
| hypothetical protein | HMPREF9720_2044 | Not Available | Positive | 2845123 - 2848095 | 112330.0 |
| transglycosylase | HMPREF9720_2045 | Not Available | Positive | 2848136 - 2850541 | 90451.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
