Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine and deoxycytidylate deaminase zinc-binding region | HMPREF9720_2022 | Not Available | Negative | 2823736 - 2824185 | 16118.4 |
| aspartate--trna ligase | HMPREF9720_2023 | Not Available | Positive | 2824331 - 2826088 | 66627.9 |
| recombination factor protein rara | HMPREF9720_2024 | Not Available | Positive | 2826228 - 2827502 | 47106.5 |
| phosphodiesterase family protein | HMPREF9720_2025 | Not Available | Positive | 2827503 - 2827997 | 18303.1 |
| hypothetical protein | HMPREF9720_2026 | Not Available | Negative | 2828067 - 2828819 | 27794.7 |
| hypothetical protein | HMPREF9720_2027 | Not Available | Positive | 2829185 - 2830369 | 43933.2 |
| atpase family associated with various cellular activities (aaa) | HMPREF9720_2028 | Not Available | Positive | 2830555 - 2833008 | 91894.1 |
| bacterial transferase hexapeptide repeat protein | HMPREF9720_2033 | Not Available | Positive | 2833173 - 2833538 | 13087.9 |
| nucleotide sugar dehydrogenase | HMPREF9720_2034 | Not Available | Positive | 2833632 - 2834897 | 46065.6 |
| virulence factor mvin | HMPREF9720_2035 | Not Available | Positive | 2835175 - 2836446 | 45317.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
