Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2002 | Not Available | Negative | 2792732 - 2793574 | 31216.3 |
| hypothetical protein | HMPREF9720_2003 | Not Available | Negative | 2793861 - 2795942 | 72507.4 |
| hypothetical protein | HMPREF9720_2004 | Not Available | Negative | 2796640 - 2799642 | 105394.0 |
| hypothetical protein | HMPREF9720_2005 | Not Available | Negative | 2799932 - 2801269 | 48412.6 |
| putative peptide chain release factor 2 | HMPREF9720_2006 | Not Available | Negative | 2801311 - 2802423 | 42205.8 |
| hypothetical protein | HMPREF9720_2007 | Not Available | Negative | 2802455 - 2803090 | 23183.6 |
| mate efflux family protein | HMPREF9720_2008 | Not Available | Negative | 2803100 - 2804599 | 54793.7 |
| cysteine--trna ligase | HMPREF9720_2009 | Not Available | Negative | 2804726 - 2806201 | 55757.1 |
| dead/deah box helicase | HMPREF9720_2010 | Not Available | Positive | 2806391 - 2807812 | 52103.7 |
| d-ala-d-ala dipeptidase | HMPREF9720_2011 | Not Available | Negative | 2807936 - 2808589 | 24473.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
