Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| respiratory-chain nadh dehydrogenase, 49 kd subunit | HMPREF9720_1992 | Not Available | Positive | 2781003 - 2782514 | 55629.6 |
| nadh ubiquinone oxidoreductase, 20 kd subunit | HMPREF9720_1993 | Not Available | Positive | 2782526 - 2783290 | 27386.0 |
| chromate transport protein | HMPREF9720_1994 | Not Available | Positive | 2783287 - 2783835 | 19902.3 |
| chromate transport protein | HMPREF9720_1995 | Not Available | Positive | 2783832 - 2784404 | 20519.6 |
| hypothetical protein | HMPREF9720_1996 | Not Available | Negative | 2784475 - 2784762 | 9813.86 |
| hypothetical protein | HMPREF9720_1997 | Not Available | Negative | 2784775 - 2785803 | 37878.1 |
| beta galactosidase small chain | HMPREF9720_1998 | Not Available | Negative | 2785816 - 2788854 | 114165.0 |
| peptidase, u32 family | HMPREF9720_1999 | Not Available | Negative | 2788879 - 2790708 | 66824.4 |
| serine--trna ligase | HMPREF9720_2000 | Not Available | Positive | 2791164 - 2792435 | 47537.0 |
| ferredoxin | HMPREF9720_2001 | Not Available | Positive | 2792487 - 2792654 | 5587.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
