Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative s-adenosylmethionine-dependent methyltransferase, yral family | HMPREF9720_1972 | Not Available | Negative | 2754863 - 2755573 | 26006.7 |
| hypothetical protein | HMPREF9720_1973 | Not Available | Negative | 2755552 - 2756061 | 17815.5 |
| alanine racemase | HMPREF9720_1974 | Not Available | Negative | 2756066 - 2758444 | 86842.4 |
| muts2 family protein | HMPREF9720_1975 | Not Available | Negative | 2758527 - 2761016 | 92366.8 |
| putative virulence factor mce family protein | HMPREF9720_1976 | Not Available | Negative | 2761038 - 2762039 | 36820.1 |
| n-acetylmuramoyl-l-alanine amidase | HMPREF9720_1977 | Not Available | Negative | 2762053 - 2763342 | 46673.6 |
| hypothetical protein | HMPREF9720_1978 | Not Available | Positive | 2763483 - 2766347 | 107754.0 |
| 4fe-4s binding domain protein | HMPREF9720_1979 | Not Available | Negative | 2766452 - 2767324 | 32428.6 |
| acetyltransferase, gnat family | HMPREF9720_1980 | Not Available | Positive | 2767372 - 2767815 | 16632.2 |
| nucleoside transporter | HMPREF9720_1981 | Not Available | Negative | 2767870 - 2769114 | 45577.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
