Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_1962 | Not Available | Positive | 2744539 - 2745015 | 17390.5 |
| metallo-beta-lactamase domain protein | HMPREF9720_1963 | Not Available | Positive | 2745267 - 2746454 | 44085.7 |
| nucleotide sugar dehydrogenase | HMPREF9720_1964 | Not Available | Positive | 2746481 - 2747794 | 48320.4 |
| yhch/yjgk/yial family protein | HMPREF9720_1965 | Not Available | Negative | 2747907 - 2748356 | 16953.4 |
| endonuclease/exonuclease/phosphatase family protein | HMPREF9720_1966 | Not Available | Negative | 2748369 - 2749520 | 43289.0 |
| peptidase, s54 family | HMPREF9720_1967 | Not Available | Negative | 2749525 - 2750133 | 22967.1 |
| dna mismatch repair domain protein | HMPREF9720_1968 | Not Available | Negative | 2750329 - 2752368 | 73028.1 |
| hypothetical protein | HMPREF9720_1969 | Not Available | Negative | 2752369 - 2752995 | 23812.5 |
| chaperone protein dnaj | HMPREF9720_1970 | Not Available | Negative | 2753026 - 2754192 | 41301.1 |
| co-chaperone grpe | HMPREF9720_1971 | Not Available | Negative | 2754197 - 2754796 | 21779.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
