Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_1028 | Not Available | Negative | 2730580 - 2731146 | 20879.4 |
| plasmid recombination enzyme | HMPREF9720_1030 | Not Available | Negative | 2731326 - 2732750 | 54123.4 |
| hypothetical protein | HMPREF9720_1029 | Not Available | Positive | 2732730 - 2732846 | 4154.08 |
| hypothetical protein | HMPREF9720_1031 | Not Available | Negative | 2732996 - 2733880 | 32933.6 |
| dna binding domain, excisionase family | HMPREF9720_1032 | Not Available | Negative | 2733883 - 2734173 | 11206.7 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_1957 | Not Available | Positive | 2734387 - 2737726 | 124536.0 |
| hypothetical protein | HMPREF9720_1958 | Not Available | Positive | 2737748 - 2739349 | 59618.6 |
| hypothetical protein | HMPREF9720_1959 | Not Available | Positive | 2739380 - 2740270 | 33740.1 |
| hypothetical protein | HMPREF9720_1960 | Not Available | Positive | 2740283 - 2742082 | 64911.4 |
| peptidase, s8/s53 family | HMPREF9720_1961 | Not Available | Positive | 2742481 - 2744529 | 71698.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
