Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s24-like protein | HMPREF9720_3037 | Not Available | Negative | 2721313 - 2721753 | 16271.5 |
| hypothetical protein | HMPREF9720_3038 | Not Available | Negative | 2721855 - 2722394 | 20033.2 |
| site-specific recombinase, phage integrase family | HMPREF9720_3039 | Not Available | Negative | 2722406 - 2723620 | 46462.6 |
| Trna-pseudo | Not Available | Not Available | Positive | 2723909 - 2724013 | Not Available |
| hypothetical protein | HMPREF9720_3041 | Not Available | Negative | 2724331 - 2725461 | 44886.2 |
| hypothetical protein | HMPREF9720_1023 | Not Available | Negative | 2725554 - 2726602 | 39759.0 |
| type i restriction modification dna specificity domain protein | HMPREF9720_1024 | Not Available | Negative | 2726608 - 2727888 | 48365.9 |
| hypothetical protein | HMPREF9720_1025 | Not Available | Negative | 2727882 - 2728598 | 27559.6 |
| hypothetical protein | HMPREF9720_1026 | Not Available | Negative | 2728613 - 2729053 | 16746.2 |
| type i restriction-modification system, m subunit | HMPREF9720_1027 | Not Available | Negative | 2729064 - 2730590 | 57582.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
