Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_1127 | Not Available | Positive | 2686554 - 2687432 | 32148.2 |
| hypothetical protein | HMPREF9720_1128 | Not Available | Negative | 2687743 - 2688063 | 11794.1 |
| hypothetical protein | HMPREF9720_1129 | Not Available | Positive | 2688070 - 2688834 | 26989.1 |
| hypothetical protein | HMPREF9720_1130 | Not Available | Positive | 2688848 - 2689177 | 11961.7 |
| tetratricopeptide repeat protein | HMPREF9720_2303 | Not Available | Negative | 2689749 - 2691218 | 56698.1 |
| hypothetical protein | HMPREF9720_3012 | Not Available | Negative | 2691489 - 2691917 | 16989.3 |
| hypothetical protein | HMPREF9720_3013 | Not Available | Negative | 2691990 - 2692907 | 35768.3 |
| hypothetical protein | HMPREF9720_3014 | Not Available | Negative | 2693170 - 2693790 | 23493.4 |
| hepn domain protein | HMPREF9720_3015 | Not Available | Positive | 2694903 - 2695817 | 35944.0 |
| hypothetical protein | HMPREF9720_3016 | Not Available | Positive | 2695861 - 2696634 | 30081.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
