Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_1117 | Not Available | Positive | 2677299 - 2677493 | 6961.06 |
| had hydrolase, family ia, variant 3 | HMPREF9720_1118 | Not Available | Positive | 2677490 - 2678116 | 23229.8 |
| hypothetical protein | HMPREF9720_1119 | Not Available | Positive | 2678645 - 2681110 | 89915.0 |
| Trna-pro | Not Available | Not Available | Positive | 2681475 - 2681552 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 2681862 - 2681936 | Not Available |
| radical sam domain protein | HMPREF9720_1122 | Not Available | Negative | 2682315 - 2683388 | 40781.9 |
| hypothetical protein | HMPREF9720_1123 | Not Available | Negative | 2683392 - 2683724 | 11560.8 |
| cold-shock dna-binding domain protein | HMPREF9720_1124 | Not Available | Positive | 2683868 - 2684068 | 7087.33 |
| hypothetical protein | HMPREF9720_1125 | Not Available | Negative | 2684194 - 2684604 | 15620.6 |
| phosphofructokinase | HMPREF9720_1126 | Not Available | Positive | 2684833 - 2686068 | 45342.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
