Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_1107 | Not Available | Negative | 2669598 - 2669762 | 5517.12 |
| hypothetical protein | HMPREF9720_1108 | Not Available | Negative | 2670194 - 2670619 | 16203.4 |
| hypothetical protein | HMPREF9720_1109 | Not Available | Negative | 2670988 - 2671257 | 9592.2 |
| hypothetical protein | HMPREF9720_1110 | Not Available | Negative | 2671269 - 2671760 | 17559.8 |
| hypothetical protein | HMPREF9720_1111 | Not Available | Positive | 2672052 - 2672165 | 4065.04 |
| glutamate decarboxylase | HMPREF9720_1112 | Not Available | Positive | 2672175 - 2673590 | 54067.1 |
| hypothetical protein | HMPREF9720_1114 | Not Available | Negative | 2673856 - 2674392 | 20038.5 |
| 3-oxo-5-alpha-steroid 4-dehydrogenase | HMPREF9720_1113 | Not Available | Positive | 2674384 - 2675145 | 28763.3 |
| oxidoreductase, fad/fmn-binding protein | HMPREF9720_1115 | Not Available | Positive | 2675153 - 2676364 | 45097.6 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | HMPREF9720_1116 | Not Available | Positive | 2676367 - 2677347 | 36006.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
