Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l13 | HMPREF9720_1097 | Not Available | Negative | 2659227 - 2659682 | 16625.3 |
| sodium ion-translocating decarboxylase, beta subunit | HMPREF9720_1098 | Not Available | Negative | 2660822 - 2661997 | 41494.2 |
| biotin-requiring enzyme | HMPREF9720_1099 | Not Available | Negative | 2662002 - 2662457 | 15661.8 |
| sodium pump decarboxylase, gamma subunit | HMPREF9720_1100 | Not Available | Negative | 2662607 - 2663056 | 15958.1 |
| carboxyl transferase domain protein | HMPREF9720_1101 | Not Available | Negative | 2663058 - 2664620 | 56739.1 |
| methylmalonyl-coa epimerase | HMPREF9720_1102 | Not Available | Negative | 2664789 - 2665199 | 15150.3 |
| hypothetical protein | HMPREF9720_1103 | Not Available | Negative | 2665354 - 2667117 | 63167.4 |
| hypothetical protein | HMPREF9720_1104 | Not Available | Positive | 2667142 - 2667657 | 18806.3 |
| lao/ao transport system atpase | HMPREF9720_1105 | Not Available | Positive | 2667662 - 2668777 | 41146.1 |
| nad-dependent deacetylase | HMPREF9720_1106 | Not Available | Negative | 2668896 - 2669594 | 25629.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
