Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had hydrolase, family ia, variant 3 | HMPREF9720_1087 | Not Available | Positive | 2644744 - 2645391 | 24392.1 |
| hypothetical protein | HMPREF9720_1088 | Not Available | Negative | 2645398 - 2648280 | 109325.0 |
| hypothetical protein | HMPREF9720_1089 | Not Available | Negative | 2648499 - 2649206 | 25484.4 |
| uvrd/rep helicase | HMPREF9720_1090 | Not Available | Positive | 2649313 - 2652456 | 118306.0 |
| abc transporter, atp-binding protein | HMPREF9720_1091 | Not Available | Positive | 2652458 - 2654401 | 69688.4 |
| hypothetical protein | HMPREF9720_1092 | Not Available | Positive | 2654404 - 2655393 | 34909.4 |
| hypothetical protein | HMPREF9720_1093 | Not Available | Positive | 2655393 - 2656358 | 34089.3 |
| translation elongation factor ts | HMPREF9720_1094 | Not Available | Negative | 2656828 - 2657700 | 31717.3 |
| ribosomal protein s2 | HMPREF9720_1095 | Not Available | Negative | 2657710 - 2658651 | 33933.9 |
| ribosomal protein s9 | HMPREF9720_1096 | Not Available | Negative | 2658835 - 2659221 | 14237.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
