Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thif family protein | HMPREF9720_1077 | Not Available | Positive | 2634173 - 2634907 | 26582.7 |
| 4-phosphoerythronate dehydrogenase | HMPREF9720_1078 | Not Available | Positive | 2634922 - 2635863 | 33711.4 |
| glycosyltransferase, group 2 family protein | HMPREF9720_1079 | Not Available | Positive | 2635863 - 2636906 | 39920.9 |
| ybak/proline--trna ligase associated domain protein | HMPREF9720_1080 | Not Available | Positive | 2636925 - 2637425 | 19888.4 |
| hypothetical protein | HMPREF9720_1081 | Not Available | Positive | 2637555 - 2638112 | 21461.8 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | HMPREF9720_1082 | Not Available | Negative | 2638224 - 2639750 | 55853.7 |
| alanine--trna ligase | HMPREF9720_1084 | Not Available | Negative | 2640008 - 2642629 | 97435.3 |
| hypothetical protein | HMPREF9720_1083 | Not Available | Positive | 2642580 - 2642711 | 5082.27 |
| peptidase, m23 family | HMPREF9720_1085 | Not Available | Positive | 2642729 - 2643727 | 38119.4 |
| peptidase, m23 family | HMPREF9720_1086 | Not Available | Positive | 2643731 - 2644681 | 36922.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
