Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation metalloprotein ybey | HMPREF9720_2183 | Not Available | Positive | 2607359 - 2607790 | 16820.9 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme gida | HMPREF9720_2184 | Not Available | Positive | 2607878 - 2609761 | 70017.7 |
| branched-chain-amino-acid transaminase | HMPREF9720_2185 | Not Available | Negative | 2609911 - 2610924 | 37586.1 |
| methionine--trna ligase | HMPREF9720_2186 | Not Available | Negative | 2610953 - 2613028 | 77634.6 |
| hypothetical protein | HMPREF9720_2187 | Not Available | Negative | 2613145 - 2615259 | 78771.8 |
| quinolinate synthetase complex, a subunit | HMPREF9720_2189 | Not Available | Negative | 2615269 - 2616210 | 34569.9 |
| hypothetical protein | HMPREF9720_2188 | Not Available | Positive | 2616200 - 2616355 | 6129.63 |
| atp-binding protein, mrp/nbp35 family | HMPREF9720_2190 | Not Available | Negative | 2616588 - 2617640 | 38081.2 |
| signal peptide peptidase sppa, 67k type | HMPREF9720_2191 | Not Available | Positive | 2617736 - 2619595 | 67419.1 |
| hypothetical protein | HMPREF9720_1066 | Not Available | Positive | 2619689 - 2622973 | 121530.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
