Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2173 | Not Available | Positive | 2594565 - 2594729 | 6022.97 |
| abc-2 type transporter | HMPREF9720_2174 | Not Available | Negative | 2594726 - 2596045 | 48717.5 |
| abc transporter, atp-binding protein | HMPREF9720_2175 | Not Available | Negative | 2596058 - 2596978 | 34542.7 |
| peptidase family m13 | HMPREF9720_2176 | Not Available | Negative | 2597216 - 2599246 | 75512.9 |
| phosphoglycerate kinase | HMPREF9720_2177 | Not Available | Negative | 2599330 - 2600592 | 45228.6 |
| hypothetical protein | HMPREF9720_2178 | Not Available | Positive | 2600599 - 2600826 | 8865.55 |
| phospholipase, patatin family | HMPREF9720_2179 | Not Available | Negative | 2600780 - 2603107 | 86698.5 |
| phenylalanine--trna ligase, alpha subunit | HMPREF9720_2180 | Not Available | Positive | 2603180 - 2604205 | 38687.5 |
| tetratricopeptide repeat protein | HMPREF9720_2181 | Not Available | Positive | 2604217 - 2606001 | 67819.6 |
| peptidase, m23 family | HMPREF9720_2182 | Not Available | Positive | 2606015 - 2607142 | 42806.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
