Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | HMPREF9720_2161 | Not Available | Negative | 2581485 - 2582753 | 47081.1 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_2162 | Not Available | Negative | 2582767 - 2586021 | 120016.0 |
| hypothetical protein | HMPREF9720_2163 | Not Available | Negative | 2585592 - 2586068 | 17536.3 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_2164 | Not Available | Negative | 2586194 - 2587168 | 36895.2 |
| rna polymerase sigma-70 factor | HMPREF9720_2165 | Not Available | Negative | 2587165 - 2587767 | 23220.2 |
| glycine c-acetyltransferase | HMPREF9720_2166 | Not Available | Positive | 2588123 - 2589310 | 43485.4 |
| transcriptional regulator, asnc family | HMPREF9720_2169 | Not Available | Positive | 2589324 - 2589797 | 17748.9 |
| hypothetical protein | HMPREF9720_2170 | Not Available | Negative | 2590096 - 2590392 | 9977.54 |
| sigma-54 interaction domain protein | HMPREF9720_2171 | Not Available | Negative | 2590576 - 2591916 | 49059.2 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF9720_2172 | Not Available | Negative | 2591919 - 2594516 | 93656.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
