Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein recn | HMPREF9720_2678 | Not Available | Negative | 2530181 - 2531824 | 59645.2 |
| phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase | HMPREF9720_2769 | Not Available | Negative | 2531831 - 2533117 | 45190.6 |
| hypothetical protein | HMPREF9720_2680 | Not Available | Negative | 2533130 - 2533456 | 12726.1 |
| outer membrane assembly lipoprotein yfio | HMPREF9720_2681 | Not Available | Negative | 2533459 - 2534280 | 31789.5 |
| hypothetical protein | HMPREF9720_2682 | Not Available | Negative | 2534391 - 2535002 | 22792.6 |
| phospholipase d domain protein | HMPREF9720_2683 | Not Available | Negative | 2535038 - 2536372 | 50242.2 |
| hypothetical protein | HMPREF9720_2684 | Not Available | Positive | 2536402 - 2536590 | 7034.58 |
| prokaryotic transcription elongation factor, grea/greb domain protein | HMPREF9720_2685 | Not Available | Positive | 2536635 - 2537144 | 18817.7 |
| hypothetical protein | HMPREF9720_2686 | Not Available | Positive | 2537286 - 2537618 | 12159.1 |
| tonb-dependent receptor | HMPREF9720_2687 | Not Available | Positive | 2537703 - 2540006 | 84788.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
