Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i phosphodiesterase / nucleotide pyrophosphatase | HMPREF9720_0408 | Not Available | Negative | 2520910 - 2522475 | 57686.2 |
| gscfa family protein | HMPREF9720_0409 | Not Available | Negative | 2522501 - 2523466 | 35771.5 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | HMPREF9720_0410 | Not Available | Positive | 2523500 - 2524312 | 29455.5 |
| putative ribose-5-phosphate isomerase b | HMPREF9720_0411 | Not Available | Negative | 2524638 - 2525093 | 16379.4 |
| hypothetical protein | HMPREF9720_0412 | Not Available | Positive | 2525197 - 2525562 | 13468.0 |
| site-specific recombinase, phage integrase family | HMPREF9720_2671 | Not Available | Negative | 2525729 - 2526946 | 47253.4 |
| Trna-his | Not Available | Not Available | Positive | 2527197 - 2527270 | Not Available |
| chaperonin gros | HMPREF9720_2673 | Not Available | Positive | 2527492 - 2527761 | 9434.6 |
| chaperonin grol | HMPREF9720_2674 | Not Available | Positive | 2527777 - 2529408 | 57646.6 |
| hypothetical protein | HMPREF9720_2675 | Not Available | Negative | 2529518 - 2530105 | 22382.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
