Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-strand binding family protein | HMPREF9720_0398 | Not Available | Positive | 2511404 - 2511901 | 18286.4 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | HMPREF9720_0399 | Not Available | Negative | 2512274 - 2513008 | 27253.5 |
| cytidine and deoxycytidylate deaminase zinc-binding region | HMPREF9720_0400 | Not Available | Negative | 2513229 - 2513666 | 16355.7 |
| preprotein translocase, seca subunit | HMPREF9720_0401 | Not Available | Negative | 2513674 - 2517036 | 127374.0 |
| glycosyltransferase, group 2 family protein | HMPREF9720_0402 | Not Available | Negative | 2517109 - 2518071 | 36255.8 |
| hypothetical protein | HMPREF9720_0403 | Not Available | Negative | 2518068 - 2518565 | 20043.6 |
| glycosyltransferase, group 2 family protein | HMPREF9720_0404 | Not Available | Negative | 2518631 - 2519041 | 15146.0 |
| hypothetical protein | HMPREF9720_0405 | Not Available | Negative | 2519052 - 2520011 | 36236.4 |
| putative fes assembly suf system protein | HMPREF9720_0406 | Not Available | Negative | 2520013 - 2520333 | 12001.8 |
| fe-s metabolism associated domain protein | HMPREF9720_0407 | Not Available | Negative | 2520461 - 2520889 | 16067.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
