Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane efflux protein | HMPREF9720_1008 | Not Available | Positive | 248294 - 249643 | 49639.4 |
| efflux transporter, rnd family, mfp subunit | HMPREF9720_1009 | Not Available | Positive | 249689 - 250681 | 36035.5 |
| heavy metal efflux pump, czca family | HMPREF9720_1010 | Not Available | Positive | 250696 - 253836 | 114998.0 |
| hypothetical protein | HMPREF9720_1011 | Not Available | Positive | 253853 - 254146 | 10837.8 |
| hypothetical protein | HMPREF9720_1012 | Not Available | Positive | 254176 - 254391 | 7777.64 |
| metallo-beta-lactamase domain protein | HMPREF9720_1013 | Not Available | Positive | 254507 - 255352 | 31931.4 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | HMPREF9720_1014 | Not Available | Positive | 255354 - 256169 | 29245.7 |
| twin arginine-targeting protein translocase tatc | HMPREF9720_1015 | Not Available | Negative | 256282 - 257118 | 30866.4 |
| twin arginine-targeting protein translocase, tata/e family | HMPREF9720_1016 | Not Available | Negative | 257125 - 257367 | 8956.19 |
| hypothetical protein | HMPREF9720_1017 | Not Available | Negative | 257410 - 257691 | 10421.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
