Alistipes sp. HGB5

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. HGB5 is a Gram-negative bacterium characterized by the presence of flagella, which likely contribute to its motility. This organism is notable for having a single replicon, indicating a straightforward genomic structure that may have implications for its replication and genetic stability. The presence of flagella in Alistipes sp. HGB5 suggests adaptations for navigating its environment, which could be essential for nutrient acquisition and colonization within its ecological niche. This motility may also play a role in interactions with other microorganisms, potentially influencing community dynamics in its habitat. The genomic data for Alistipes sp. HGB5 can be accessed from the accession number AENZ00000000.1. This information provides a basis for further exploration of its genetic makeup and functional capabilities, which could reveal additional insights into its biology. Overall, the traits of Alistipes sp. HGB5 highlight its potential ecological role as a motile, Gram-negative bacterium that may contribute to microbial diversity and functionality in its environment. Understanding such traits can enhance our knowledge of microbial ecology and the specific roles different species play in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. HGB5
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. HGB5 contig00005, whole genome shotgun sequence.

Gene Summary

Adenine Count

740743 bp

Thymine Count

730936 bp

Guanine Count

993821 bp

Cytosine Count

999115 bp

Genome Length

3464615 bp

Protein-coding Genes

2946 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane efflux proteinHMPREF9720_1008Not AvailablePositive248294 - 24964349639.4
efflux transporter, rnd family, mfp subunitHMPREF9720_1009Not AvailablePositive249689 - 25068136035.5
heavy metal efflux pump, czca familyHMPREF9720_1010Not AvailablePositive250696 - 253836114998.0
hypothetical proteinHMPREF9720_1011Not AvailablePositive253853 - 25414610837.8
hypothetical proteinHMPREF9720_1012Not AvailablePositive254176 - 2543917777.64
metallo-beta-lactamase domain proteinHMPREF9720_1013Not AvailablePositive254507 - 25535231931.4
oxidoreductase, short chain dehydrogenase/reductase family proteinHMPREF9720_1014Not AvailablePositive255354 - 25616929245.7
twin arginine-targeting protein translocase tatcHMPREF9720_1015Not AvailableNegative256282 - 25711830866.4
twin arginine-targeting protein translocase, tata/e familyHMPREF9720_1016Not AvailableNegative257125 - 2573678956.19
hypothetical proteinHMPREF9720_1017Not AvailableNegative257410 - 25769110421.5

Displaying genes 211 – 220 of 3009 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.