Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | HMPREF9720_1881 | Not Available | Positive | 2491559 - 2492575 | 38491.9 |
| fibronectin type iii domain protein | HMPREF9720_0380 | Not Available | Negative | 2492632 - 2493798 | 42984.1 |
| hypothetical protein | HMPREF9720_0379 | Not Available | Positive | 2493770 - 2493886 | 3747.25 |
| hypothetical protein | HMPREF9720_0381 | Not Available | Positive | 2494469 - 2496610 | 78380.8 |
| peptidase m16 inactive domain protein | HMPREF9720_0382 | Not Available | Negative | 2496689 - 2499550 | 107292.0 |
| hypothetical protein | HMPREF9720_0383 | Not Available | Negative | 2499601 - 2500113 | 17833.1 |
| aspartate 1-decarboxylase | HMPREF9720_0384 | Not Available | Negative | 2500241 - 2500600 | 13273.1 |
| pantoate--beta-alanine ligase | HMPREF9720_0385 | Not Available | Negative | 2500600 - 2501463 | 31999.2 |
| hypothetical protein | HMPREF9720_0386 | Not Available | Positive | 2501802 - 2502458 | 23355.2 |
| hypothetical protein | HMPREF9720_0387 | Not Available | Negative | 2502455 - 2502604 | 5728.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
