Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2963 | Not Available | Negative | 2476467 - 2476643 | 6371.58 |
| hypothetical protein | HMPREF9720_2964 | Not Available | Negative | 2477467 - 2478525 | 40081.8 |
| hypothetical protein | HMPREF9720_2965 | Not Available | Negative | 2478503 - 2479222 | 26310.5 |
| hypothetical protein | HMPREF9720_2966 | Not Available | Negative | 2479432 - 2481183 | 66984.0 |
| hypothetical protein | HMPREF9720_2967 | Not Available | Negative | 2481350 - 2482555 | 46936.4 |
| hypothetical protein | HMPREF9720_1876 | Not Available | Positive | 2483905 - 2484546 | 24487.6 |
| hypothetical protein | HMPREF9720_1877 | Not Available | Positive | 2484571 - 2485203 | 23265.6 |
| dna-directed dna polymerase | HMPREF9720_1878 | Not Available | Negative | 2485356 - 2488232 | 107635.0 |
| hypothetical protein | HMPREF9720_1879 | Not Available | Negative | 2488329 - 2488622 | 11207.4 |
| hypothetical protein | HMPREF9720_1880 | Not Available | Positive | 2489418 - 2491340 | 68500.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
