Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | HMPREF9720_1359 | Not Available | Positive | 2465543 - 2466274 | 25702.9 |
| imidazoleglycerol phosphate synthase, cyclase subunit | HMPREF9720_1360 | Not Available | Positive | 2466256 - 2467008 | 26741.1 |
| phosphoribosyl-atp diphosphatase | HMPREF9720_1361 | Not Available | Positive | 2467014 - 2467634 | 22675.1 |
| hypothetical protein | HMPREF9720_1362 | Not Available | Negative | 2467774 - 2469322 | 59617.1 |
| 4-alpha-glucanotransferase | HMPREF9720_3048 | Not Available | Negative | 2469323 - 2470835 | 58069.6 |
| hypothetical protein | HMPREF9720_2958 | Not Available | Negative | 2470842 - 2471450 | 23133.1 |
| hypothetical protein | HMPREF9720_2959 | Not Available | Negative | 2471479 - 2472225 | 29492.4 |
| hypothetical protein | HMPREF9720_2960 | Not Available | Negative | 2472424 - 2473068 | 24769.0 |
| clan aa aspartic protease, tigr02281 family | HMPREF9720_2961 | Not Available | Negative | 2473403 - 2475463 | 79059.5 |
| hypothetical protein | HMPREF9720_2962 | Not Available | Negative | 2475747 - 2476103 | 14296.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
