Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, group 1 family protein | HMPREF9720_1339 | Not Available | Positive | 2443624 - 2444805 | 45020.6 |
| radical sam domain protein | HMPREF9720_1340 | Not Available | Positive | 2444807 - 2445877 | 41157.7 |
| glycosyltransferase, group 1 family protein | HMPREF9720_1341 | Not Available | Positive | 2445885 - 2447018 | 42382.8 |
| ybak/ebsc protein | HMPREF9720_1342 | Not Available | Negative | 2447028 - 2447519 | 17656.5 |
| hypothetical protein | HMPREF9720_1343 | Not Available | Positive | 2447609 - 2450122 | 94191.8 |
| had hydrolase, family ia, variant 3 | HMPREF9720_1344 | Not Available | Positive | 2450182 - 2450841 | 23758.7 |
| hypothetical protein | HMPREF9720_1345 | Not Available | Positive | 2451133 - 2451498 | 13766.3 |
| hypothetical protein | HMPREF9720_1346 | Not Available | Negative | 2451612 - 2452526 | 33207.8 |
| hypothetical protein | HMPREF9720_1347 | Not Available | Negative | 2452527 - 2453672 | 41295.0 |
| yqey-like protein | HMPREF9720_1348 | Not Available | Negative | 2453690 - 2454166 | 17138.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
